BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025G04SP1|AL428435
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1372 1760 0.0
>3x_Contig1372
Length = 7292
Score = 1760 bits (887), Expect = 0.0
Identities = 888/889 (99%)
Strand = Plus / Minus
Query: 1 gatctaccaaagtgactataataccgctatctccccttaattctgagtccacaaatccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6569 gatctaccaaagtgactataataccgctatctccccttaattctgagtccacaaatccgt 6510
Query: 61 ataattccctagcaatttcttcaagaaacacatttttattcaaatatttttctctatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6509 ataattccctagcaatttcttcaagaaacacatttttattcaaatatttttctctatcaa 6450
Query: 121 caagtaatattgattcattactcttacttttgcgattgccttgatacattttctcaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6449 caagtaatattgattcattactcttacttttgcgattgccttgatacattttctcaatat 6390
Query: 181 cttcagctaatgccattaacttattcaaatcgcttagtgcgttcgacataacaatattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6389 cttcagctaatgccattaacttattcaaatcgcttagtgcgttcgacataacaatattat 6330
Query: 241 tcttcagtagctgttgttctttatttttttctaatgcagtgatgccaatcaaatttatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6329 tcttcagtagctgttgttctttatttttttctaatgcagtgatgccaatcaaatttatat 6270
Query: 301 cattattagataaaacaagatcaggatcgatcaccggatctgtcggaacaccattgacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6269 cattattagataaaacaagatcaggatcgatcaccggatctgtcggaacaccattgacac 6210
Query: 361 tgagaacattttgattaaataaatgtttggattctttccttgaaatttcttgcaactgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6209 tgagaacattttgattaaataaatgtttggattctttccttgaaatttcttgcaactgct 6150
Query: 421 ttaccaaagtttcatagaataatgccccgtcagttttcctgaaactcaattgagcaaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6149 ttaccaaagtttcatagaataatgccccgtcagttttcctgaaactcaattgagcaaaac 6090
Query: 481 tttcttctccacttggtgtcttttcctcgagtagtatcctcactctagaatcttttactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6089 tttcttctccacttggtgtcttttcctcgagtagtatcctcactctagaatcttttactt 6030
Query: 541 ttgatgtccttctcgattgtktcaatcgtgcaccacatatttcacagtttctaatctgtg 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6029 ttgatgtccttctcgattgtttcaatcgtgcaccacatatttcacagtttctaatctgtg 5970
Query: 601 gatgattgataaaggtacatacaggacatatgttctcctttggagtttcctctaaatcct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5969 gatgattgataaaggtacatacaggacatatgttctcctttggagtttcctctaaatcct 5910
Query: 661 caaccaccgttttaattgaattttgaaccatatctctgtcaacctcaacaccacaactac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5909 caaccaccgttttaattgaattttgaaccatatctctgtcaacctcaacaccacaactac 5850
Query: 721 cgcatggtggcatattcagcccattagaatcaagagtcgagtatattctattttcaactc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5849 cgcatggtggcatattcagcccattagaatcaagagtcgagtatattctattttcaactc 5790
Query: 781 cacagataggacagttccattgcgtagtatgcacttgttttcccttctcttcgataggtg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5789 cacagataggacagttccattgcgtagtatgcacttgttttcccttctcttcgataggtg 5730
Query: 841 cctcattctgtgataattctttgaagaataatataatcttggctgatct 889
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5729 cctcattctgtgataattctttgaagaataatataatcttggctgatct 5681
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8606
Number of Sequences: 1807
Number of extensions: 8606
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)